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BMCBI
2010
121views more  BMCBI 2010»
13 years 8 months ago
MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
Eduardo Corel, Florian Pitschi, Ivan Laprevotte, G...
BMCBI
2006
155views more  BMCBI 2006»
13 years 8 months ago
A powerful method for detecting differentially expressed genes from GeneChip arrays that does not require replicates
Background: Studies of differential expression that use Affymetrix GeneChip arrays are often carried out with a limited number of replicates. Reasons for this include financial co...
Anne-Mette K. Hein, Sylvia Richardson
BMCBI
2011
13 years 2 months ago
Tree Pruner: An efficient tool for selecting data from a biased genetic database
Background: Large databases of genetic data are often biased in their representation. Thus, selection of genetic data with desired properties, such as evolutionary representation ...
Mohan Krishnamoorthy, Pragneshkumar Patel, Mira Di...
BMCBI
2010
145views more  BMCBI 2010»
13 years 8 months ago
WaveletQuant, an improved quantification software based on wavelet signal threshold de-noising for labeled quantitative proteomi
Background: Quantitative proteomics technologies have been developed to comprehensively identify and quantify proteins in two or more complex samples. Quantitative proteomics base...
Fan Mo, Qun Mo, Yuanyuan Chen, David R. Goodlett, ...
SIGMOD
2007
ACM
229views Database» more  SIGMOD 2007»
14 years 8 months ago
Spark: top-k keyword query in relational databases
With the increasing amount of text data stored in relational databases, there is a demand for RDBMS to support keyword queries over text data. As a search result is often assemble...
Yi Luo, Xuemin Lin, Wei Wang 0011, Xiaofang Zhou