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CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
14 years 1 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
ICDM
2005
IEEE
161views Data Mining» more  ICDM 2005»
14 years 1 months ago
Making Logistic Regression a Core Data Mining Tool with TR-IRLS
Binary classification is a core data mining task. For large datasets or real-time applications, desirable classifiers are accurate, fast, and need no parameter tuning. We presen...
Paul Komarek, Andrew W. Moore
BMCBI
2007
107views more  BMCBI 2007»
13 years 7 months ago
Prediction of potential drug targets based on simple sequence properties
Background: During the past decades, research and development in drug discovery have attracted much attention and efforts. However, only 324 drug targets are known for clinical dr...
Qingliang Li, Luhua Lai
WWW
2007
ACM
14 years 8 months ago
Extraction and search of chemical formulae in text documents on the web
Often scientists seek to search for articles on the Web related to a particular chemical. When a scientist searches for a chemical formula using a search engine today, she gets ar...
Bingjun Sun, Qingzhao Tan, Prasenjit Mitra, C. Lee...
WABI
2009
Springer
155views Bioinformatics» more  WABI 2009»
14 years 2 months ago
A Markov Classification Model for Metabolic Pathways
Background: This paper considers the problem of identifying pathways through metabolic networks that relate to a specific biological response. Our proposed model, HME3M, first ide...
Timothy Hancock, Hiroshi Mamitsuka