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BMCBI
2007
113views more  BMCBI 2007»
13 years 7 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
BMCBI
2011
13 years 2 months ago
iPhy: an integrated phylogenetic workbench for supermatrix analyses
Background: The increasing availability of molecular sequence data means that the accuracy of future phylogenetic studies is likely to by limited by systematic bias and taxon choi...
Martin O. Jones, Georgios D. Koutsovoulos, Mark L....
BMCBI
2011
13 years 2 months ago
SAQC: SNP array quality control
Background: Genome-wide single-nucleotide polymorphism (SNP) arrays containing hundreds of thousands of SNPs from the human genome have proven useful for studying important human ...
Hsin-Chou Yang, Hsin-Chi Lin, Meijyh Kang, Chun-Ho...
ICML
2009
IEEE
14 years 8 months ago
SimpleNPKL: simple non-parametric kernel learning
Previous studies of Non-Parametric Kernel (NPK) learning usually reduce to solving some Semi-Definite Programming (SDP) problem by a standard SDP solver. However, time complexity ...
Jinfeng Zhuang, Ivor W. Tsang, Steven C. H. Hoi
ICSE
2004
IEEE-ACM
14 years 7 months ago
Automated Support for Development, Maintenance, and Testing in the Presence of Implicit Control Flow
Although object-oriented languages can improve programming practices, their characteristics may introduce new problems for software engineers. One important problem is the presenc...
Saurabh Sinha, Alessandro Orso, Mary Jean Harrold