77 search results - page 1 / 16 » An enhanced RNA alignment benchmark for sequence alignment p... |
ALMOB
2006
13 years 11 months ago
2006
Background: The performance of alignment programs is traditionally tested on sets of protein sequences, of which a reference alignment is known. Conclusions drawn from such protei...
BMCBI
2008
13 years 11 months ago
2008
Background: Identification of RNA homologs within genomic stretches is difficult when pairwise sequence identity is low or unalignable flanking residues are present. In both cases...
BMCBI
2008
13 years 11 months ago
2008
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
NAR
2010
13 years 5 months ago
2010
Alignment-based programs are valuable tools for finding potential homologs in genome sequences. Previously, it has been shown that partition function posterior probabilities attun...
COMPLIFE
2005
Springer
14 years 4 months ago
2005
Springer
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...