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CIBCB
2006
IEEE
14 years 1 months ago
Optimization of the Sliding Window Size for Protein Structure Prediction
- Sliding window based methods are relatively often applied in prediction of various aspects related to protein structure. Despite their wide spread use, researchers did not establ...
Ke Chen, Lukasz A. Kurgan, Jishou Ruan
IJBRA
2007
80views more  IJBRA 2007»
13 years 7 months ago
On predicting secondary structure transition
A function of a protein is dependent on its structure; therefore, predicting a protein structure from an amino acid sequence is an active area of research. Optimally predicting a ...
Raja Loganantharaj, Vivek Philip
GECCO
2007
Springer
132views Optimization» more  GECCO 2007»
14 years 1 months ago
Automated alphabet reduction method with evolutionary algorithms for protein structure prediction
Jaume Bacardit, Michael Stout, Jonathan D. Hirst, ...
BMCBI
2008
130views more  BMCBI 2008»
13 years 7 months ago
Structural descriptor database: a new tool for sequence-based functional site prediction
Background: The Structural Descriptor Database (SDDB) is a web-based tool that predicts the function of proteins and functional site positions based on the structural properties o...
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tere...
CIBCB
2005
IEEE
14 years 1 months ago
The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space
— Part of the challenge of modeling protein sequences is their discrete nature. Many of the most powerful statistical and learning techniques are applicable to points in a Euclid...
Eleazar Eskin, Sagi Snir