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» An ontology for bioinformatics applications
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BMCBI
2004
142views more  BMCBI 2004»
13 years 7 months ago
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
Background: Microarray and other high-throughput technologies are producing large sets of interesting genes that are difficult to analyze directly. Bioinformatics tools are needed...
Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Sno...
CIKM
2005
Springer
14 years 1 months ago
Semantic similarity over the gene ontology: family correlation and selecting disjunctive ancestors
Many bioinformatics applications would benefit from comparing proteins based on their biological role rather than their sequence. In most biological databases, proteins are alrea...
Francisco M. Couto, Mário J. Silva, Pedro C...
BMCBI
2007
209views more  BMCBI 2007»
13 years 7 months ago
SYMBIOmatics: Synergies in Medical Informatics and Bioinformatics - exploring current scientific literature for emerging topics
Background: The SYMBIOmatics Specific Support Action (SSA) is "an information gathering and dissemination activity" that seeks "to identify synergies between the bi...
Dietrich Rebholz-Schuhmann, Graham Cameron, Domini...
EDBT
2006
ACM
206views Database» more  EDBT 2006»
14 years 7 months ago
The SIRUP Ontology Query API in Action
Ontology languages to represent ontologies exist in large numbers, and users who want to access or reuse ontologies can often be confronted with a language they do not know. Theref...
Patrick Ziegler, Christoph Sturm, Klaus R. Dittric...
SEMWEB
2009
Springer
14 years 2 months ago
Change Representation For OWL 2 Ontologies
Ontologies are entities that evolve over time, therefore it is essential to represent and manage changes to ontologies along with the ontologies themselves. In this paper we propos...
Raúl Palma, Peter Haase, Óscar Corch...