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» An ontology for bioinformatics applications
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HPCC
2007
Springer
14 years 3 months ago
An Adaptive Parallel Hierarchical Clustering Algorithm
Clustering of data has numerous applications and has been studied extensively. It is very important in Bioinformatics and data mining. Though many parallel algorithms have been des...
Zhaopeng Li, Kenli Li, Degui Xiao, Lei Yang
ICDM
2006
IEEE
132views Data Mining» more  ICDM 2006»
14 years 3 months ago
Mining for Tree-Query Associations in a Graph
New applications of data mining, such as in biology, bioinformatics, or sociology, are faced with large datasets structured as graphs. We present an efficient algorithm for minin...
Eveline Hoekx, Jan Van den Bussche
IISWC
2006
IEEE
14 years 3 months ago
Load Instruction Characterization and Acceleration of the BioPerf Programs
The load instructions of some of the bioinformatics applications in the BioPerf suite possess interesting characteristics: only a few static loads cover almost the entire dynamic ...
Paruj Ratanaworabhan, Martin Burtscher
IPPS
2006
IEEE
14 years 3 months ago
Parallel FPGA-based all-pairs shortest-paths in a directed graph
With rapid advances in VLSI technology, Field Programmable Gate Arrays (FPGAs) are receiving the attention of the Parallel and High Performance Computing community. In this paper,...
Uday Bondhugula, Ananth Devulapalli, Joseph Fernan...
INFOSCALE
2006
ACM
14 years 3 months ago
Scheduling divisible loads in the dynamic heterogeneous grid environment
According to the special features of the dynamic heterogeneous grid environment, a loose-coupled and scalable resource model is described by a hybrid multi-level tree reflecting a...
Tao Zhu, Yongwei Wu, Guangwen Yang