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BMCBI
2007
115views more  BMCBI 2007»
13 years 8 months ago
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis
Background: There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often sp...
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry ...
SODA
2010
ACM
397views Algorithms» more  SODA 2010»
14 years 6 months ago
Improved Approximation Algorithms for the Minimum Latency Problem via Prize-Collecting Strolls
The minimum latency problem (MLP) is a well-studied variant of the traveling salesman problem (TSP). In the MLP, the server's goal is to minimize the average latency that the...
Aaron Archer, Anna Blasiak
CVPR
2010
IEEE
14 years 5 months ago
Fast Image Alignment in the Fourier Domain
In this paper we propose a framework for gradient descent image alignment in the Fourier domain. Specifically, we propose an extension to the classical Lucas & Kanade (LK) a...
Ahmed Ashraf, Simon Lucey, Tsuhan Chen
GECCO
2007
Springer
160views Optimization» more  GECCO 2007»
14 years 3 months ago
Hill climbing on discrete HIFF: exploring the role of DNA transposition in long-term artificial evolution
We show how a random mutation hill climber that does multilevel selection utilizes transposition to escape local optima on the discrete Hierarchical-If-And-Only-If (HIFF) problem....
Susan Khor
BMCBI
2010
134views more  BMCBI 2010»
13 years 9 months ago
BayesMotif: de novo protein sorting motif discovery from impure datasets
Background: Protein sorting is the process that newly synthesized proteins are transported to their target locations within or outside of the cell. This process is precisely regul...
Jianjun Hu, Fan Zhang