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» Analysis of recursively parallel programs
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ICCSA
2004
Springer
14 years 2 months ago
A Sequence-Focused Parallelisation of EMBOSS on a Cluster of Workstations
Abstract. A number of individual bioinformatics applications (particularly BLAST and other sequence searching methods) have recently been implemented over clusters of workstations ...
Karl Podesta, Martin Crane, Heather J. Ruskin
SIGARCH
2008
152views more  SIGARCH 2008»
13 years 8 months ago
OpenDF: a dataflow toolset for reconfigurable hardware and multicore systems
This paper presents the OpenDF framework and recalls that dataflow programming was once invented to address the problem of parallel computing. We discuss the problems with an impe...
Shuvra S. Bhattacharyya, Gordon J. Brebner, Jö...
GISCIENCE
2004
Springer
130views GIS» more  GISCIENCE 2004»
14 years 2 months ago
Comparing Exact and Approximate Spatial Auto-regression Model Solutions for Spatial Data Analysis
The spatial auto-regression (SAR) model is a popular spatial data analysis technique, which has been used in many applications with geo-spatial datasets. However, exact solutions f...
Baris M. Kazar, Shashi Shekhar, David J. Lilja, Ra...
ICPP
2009
IEEE
14 years 3 months ago
Integrated Performance Views in Charm++: Projections Meets TAU
Abstract—The Charm++ parallel programming system provides a modular performance interface that can be used to extend its performance measurement and analysis capabilities. The in...
Scott Biersdorff, Chee Wai Lee, Allen D. Malony, L...
LCPC
2007
Springer
14 years 2 months ago
Modeling Relations between Inputs and Dynamic Behavior for General Programs
Program dynamic optimization, adaptive to runtime behavior changes, has become increasingly important for both performance and energy savings. However, most runtime optimizations o...
Xipeng Shen, Feng Mao