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» Analyzing time series gene expression data
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ISBI
2004
IEEE
14 years 9 months ago
Covariance of Kinetic Parameter Estimators Based on Time Activity Curve Reconstructions: Preliminary Study on 1D Dynamic Imaging
We provide approximate expressions for the covariance matrix of kinetic parameter estimators based on time activity curve (TAC) reconstructions when TACs are modeled as a linear c...
Sangtae Ahn, Jeffrey A. Fessler, Thomas E. Nichols...
IMSCCS
2006
IEEE
14 years 2 months ago
Frequency Distribution of TATA Box and Extension Sequences on Human Promoters
Background: TATA box is one of the most important transcription factor binding sites. But the exact sequences of TATA box are still not very clear. Results: In this study, we cond...
Wei Shi, Wanlei Zhou
BMCBI
2010
122views more  BMCBI 2010»
13 years 3 months ago
Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PF
Background: A new paradigm of biological investigation takes advantage of technologies that produce large high throughput datasets, including genome sequences, interactions of pro...
Troy Hawkins, Meghana Chitale, Daisuke Kihara
NIPS
2004
13 years 10 months ago
Joint Probabilistic Curve Clustering and Alignment
Clustering and prediction of sets of curves is an important problem in many areas of science and engineering. It is often the case that curves tend to be misaligned from each othe...
Scott Gaffney, Padhraic Smyth
BMCBI
2010
138views more  BMCBI 2010»
13 years 9 months ago
UFFizi: a generic platform for ranking informative features
Background: Feature selection is an important pre-processing task in the analysis of complex data. Selecting an appropriate subset of features can improve classification or cluste...
Assaf Gottlieb, Roy Varshavsky, Michal Linial, Dav...