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BMCBI
2005
152views more  BMCBI 2005»
13 years 7 months ago
CoPub Mapper: mining MEDLINE based on search term co-publication
Background: High throughput microarray analyses result in many differentially expressed genes that are potentially responsible for the biological process of interest. In order to ...
Blaise T. F. Alako, Antoine Veldhoven, Sjozef van ...
STACS
2009
Springer
14 years 1 months ago
A Unified Algorithm for Accelerating Edit-Distance Computation via Text-Compression
The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic-programming s...
Danny Hermelin, Gad M. Landau, Shir Landau, Oren W...
CIKM
2005
Springer
14 years 19 days ago
Optimizing candidate check costs for bitmap indices
In this paper, we propose a new strategy for optimizing the placement of bin boundaries to minimize the cost of query evaluation using bitmap indices with binning. For attributes ...
Doron Rotem, Kurt Stockinger, Kesheng Wu
FPGA
2004
ACM
119views FPGA» more  FPGA 2004»
14 years 14 days ago
A quantitative analysis of the speedup factors of FPGAs over processors
The speedup over a microprocessor that can be achieved by implementing some programs on an FPGA has been extensively reported. This paper presents an analysis, both quantitative a...
Zhi Guo, Walid A. Najjar, Frank Vahid, Kees A. Vis...
RECOMB
2007
Springer
14 years 7 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss