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BMCBI
2007
126views more  BMCBI 2007»
13 years 7 months ago
Multiple non-collinear TF-map alignments of promoter regions
Background: The analysis of the promoter sequence of genes with similar expression patterns is a basic tool to annotate common regulatory elements. Multiple sequence alignments ar...
Enrique Blanco, Roderic Guigó, Xavier Messe...
EOR
2006
72views more  EOR 2006»
13 years 7 months ago
Experimental tour-based travel demand models
CT In this paper some experimental sequential models for the simulation of trip-chains are presented; the models have been calibrated on the base of a survey made in a medium-sized...
Demetrio C. Festa, Daniela Condino, Gabriella Mazz...
BMCBI
2007
116views more  BMCBI 2007»
13 years 7 months ago
MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes
Background: Despite a remarkable success in the computational prediction of genes in Bacteria and Archaea, a lack of comprehensive understanding of prokaryotic gene structures pre...
Huaiqiu Zhu, Gang-Qing Hu, Yi-Fan Yang, Jin Wang, ...
ESE
2006
154views Database» more  ESE 2006»
13 years 7 months ago
Prioritizing JUnit Test Cases: An Empirical Assessment and Cost-Benefits Analysis
Test case prioritization provides a way to run test cases with the highest priority earliest. Numerous empirical studies have shown that prioritization can improve a test suite�...
Hyunsook Do, Gregg Rothermel, Alex Kinneer
JCB
2008
52views more  JCB 2008»
13 years 7 months ago
Spectrum-Based De Novo Repeat Detection in Genomic Sequences
A novel approach to the detection of genomic repeats is presented in this paper. The technique, dubbed SAGRI (Spectrum Assisted Genomic Repeat Identifier), is based on the spectru...
Huy Hoang Do, Kwok Pui Choi, Franco P. Preparata, ...
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