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BMCBI
2010
147views more  BMCBI 2010»
13 years 7 months ago
baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data
Background: High throughput sequencing has become an important technology for studying expression levels in many types of genomic, and particularly transcriptomic, data. One key w...
Thomas J. Hardcastle, Krystyna A. Kelly
BMCBI
2007
106views more  BMCBI 2007»
13 years 7 months ago
Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework
Background: Serial Analysis of Gene Expression (SAGE) is a high-throughput method for inferring mRNA expression levels from the experimentally generated sequence based tags. Stand...
Michael A. Gilchrist, Hong Qin, Russell L. Zaretzk...
ICPR
2002
IEEE
14 years 8 months ago
Fractional Component Analysis (FCA) for Mixed Signals
This paper proposes the fractional component analysis (FCA), whose goal is to decompose the observed signal into component signals and recover their fractions. The uniqueness of o...
Asanobu Kitamoto
BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
Measuring similarities between gene expression profiles through new data transformations
Background: Clustering methods are widely used on gene expression data to categorize genes with similar expression profiles. Finding an appropriate (dis)similarity measure is crit...
Kyungpil Kim, Shibo Zhang, Keni Jiang, Li Cai, In-...
IDA
2011
Springer
13 years 2 months ago
A parallel, distributed algorithm for relational frequent pattern discovery from very large data sets
The amount of data produced by ubiquitous computing applications is quickly growing, due to the pervasive presence of small devices endowed with sensing, computing and communicatio...
Annalisa Appice, Michelangelo Ceci, Antonio Turi, ...