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RSFDGRC
2005
Springer
192views Data Mining» more  RSFDGRC 2005»
14 years 26 days ago
An Open Source Microarray Data Analysis System with GUI: Quintet
We address Quintet, an R-based unified cDNA microarray data analysis system with GUI. Five principal categories of microarray data analysis have been coherently integrated in Quin...
Jun-kyoung Choe, Tae-Hoon Chung, Sunyong Park, Hwa...
ICCSA
2005
Springer
14 years 27 days ago
A Penalized Likelihood Estimation on Transcriptional Module-Based Clustering
In this paper, we propose a new clustering procedure for high dimensional microarray data. Major difficulty in cluster analysis of microarray data is that the number of samples to ...
Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi
BMCBI
2008
132views more  BMCBI 2008»
13 years 7 months ago
Computational cluster validation for microarray data analysis: experimental assessment of Clest, Consensus Clustering, Figure of
Background: Inferring cluster structure in microarray datasets is a fundamental task for the so-called -omic sciences. It is also a fundamental question in Statistics, Data Analys...
Raffaele Giancarlo, Davide Scaturro, Filippo Utro
BMCBI
2007
157views more  BMCBI 2007»
13 years 7 months ago
Improving gene set analysis of microarray data by SAM-GS
Background: Gene-set analysis evaluates the expression of biological pathways, or a priori defined gene sets, rather than that of individual genes, in association with a binary ph...
Irina Dinu, John D. Potter, Thomas Mueller, Qi Liu...
EVOW
2004
Springer
14 years 24 days ago
Evolutionary Search of Thresholds for Robust Feature Set Selection: Application to the Analysis of Microarray Data
Abstract. We deal with two important problems in pattern recognition that arise in the analysis of large datasets. While most feature subset selection methods use statistical techn...
Carlos Cotta, Christian Sloper, Pablo Moscato