We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao,...
The Nearest Codeword Problem (NCP) is a basic algorithmic question in the theory of error-correcting codes. Given a point v ∈ Fn 2 and a linear space L ⊆ Fn 2 of dimension k NC...
We give a constant factor approximation algorithm for the following generalization of the k-median problem. We are given a set of clients and facilities in a metric space. Each fa...
We present a novel framework for tree-structure embedded density estimation and its fast approximation for mode seeking. The proposed method could find diverse applications in co...
This paper examines the problem of database organization and retrieval based on computing metric pairwise distances. A low-dimensional Euclidean approximation of a high-dimensiona...