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NAR
2011
225views Computer Vision» more  NAR 2011»
12 years 11 months ago
IsoBase: a database of functionally related proteins across PPI networks
We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...
KAIS
2006
126views more  KAIS 2006»
13 years 9 months ago
Fast and exact out-of-core and distributed k-means clustering
Clustering has been one of the most widely studied topics in data mining and k-means clustering has been one of the popular clustering algorithms. K-means requires several passes ...
Ruoming Jin, Anjan Goswami, Gagan Agrawal
BMCBI
2005
198views more  BMCBI 2005»
13 years 8 months ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
KDD
2012
ACM
196views Data Mining» more  KDD 2012»
11 years 11 months ago
Chromatic correlation clustering
We study a novel clustering problem in which the pairwise relations between objects are categorical. This problem can be viewed as clustering the vertices of a graph whose edges a...
Francesco Bonchi, Aristides Gionis, Francesco Gull...
ICDE
2009
IEEE
156views Database» more  ICDE 2009»
14 years 10 months ago
Distributed Structural Relaxation of XPath Queries
Due to the structural heterogeneity of XML, queries are often interpreted approximately. This is achieved by relaxing the query and ranking the results based on their relevance to ...
Georgia Koloniari, Evaggelia Pitoura