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PVLDB
2010
342views more  PVLDB 2010»
13 years 6 months ago
CRIUS: User-Friendly Database Design
Non-technical users are increasingly adding structures to their data. This gives rise to the need for database design. However, traditional database design is deliberate and heavy...
Li Qian, Kristen LeFevre, H. V. Jagadish
BMCBI
2007
104views more  BMCBI 2007»
13 years 8 months ago
Predicting active site residue annotations in the Pfam database
Background: Approximately 5% of Pfam families are enzymatic, but only a small fraction of the sequences within these families (<0.5%) have had the residues responsible for cata...
Jaina Mistry, Alex Bateman, Robert D. Finn
NAR
2002
67views more  NAR 2002»
13 years 7 months ago
The TRIPLES database: a community resource for yeast molecular biology
TRIPLES is a web-accessible database of TRansposonInsertion Phenotypes, Localization and Expression in Saccharomyces cerevisiae--a relational database housing nearly half a millio...
Anuj Kumar, Kei-Hoi Cheung, Nick P. Tosches, Peter...
XSYM
2004
Springer
129views Database» more  XSYM 2004»
14 years 1 months ago
Fractional XSketch Synopses for XML Databases
A key step in the optimization of declarative queries over XML data is estimating the selectivity of path expressions, i.e., the number of elements reached by a specific navigatio...
Natasha Drukh, Neoklis Polyzotis, Minos N. Garofal...
BMCBI
2007
115views more  BMCBI 2007»
13 years 7 months ago
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis
Background: There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often sp...
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry ...