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    » Approximate matching of secondary structures
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    IIE
    2006
    113views more  IIE 2006»
    Gender and Programming Contests: Mitigating Exclusionary Practices
    13 years 9 months ago
    Gender and Programming Contests: Mitigating Exclusionary Practices
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    Individuals vary across many dimensions due to the effects of gender-based, personality, and cultural differences. Consequently, programming contests with a limited and rigid stru...
    Maryanne Fisher, Anthony Cox
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    GIS
    1999
    ACM
    88views Automated Reasoning» more  GIS 1999»
    A Provably Efficient Computational Model for Approximate Spatiotemporal Retrieval
    14 years 1 months ago
    A Provably Efficient Computational Model for Approximate Spatiotemporal Retrieval
    Download  www.jucs.org
    : The paper is concerned with the effective and efficient processing of spatiotemporal selection queries under varying degrees of approximation. Such queries may employ operators l...
    Vasilis Delis, Christos Makris, Spyros Sioutas
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    BMCBI
    2008
    140views more  BMCBI 2008»
    Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
    13 years 9 months ago
    Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
    Download  www.biomedcentral.com
    Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
    Kazutaka Katoh, Hiroyuki Toh
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    BMCBI
    2007
    134views more  BMCBI 2007»
    Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
    13 years 9 months ago
    Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
    Download  www.biomedcentral.com
    Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
    Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
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    CSB
    2003
    IEEE
    116views Bioinformatics» more  CSB 2003»
    Towards Index-based Similarity Search for Protein Structure Databases
    14 years 2 months ago
    Towards Index-based Similarity Search for Protein Structure Databases
    Download  conferences.computer.org
    We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
    Orhan Çamoglu, Tamer Kahveci, Ambuj K. Sing...
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