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RECOMB
2006
Springer
14 years 8 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
SECON
2007
IEEE
14 years 1 months ago
Coverage Problem for Sensors Embedded in Temperature Sensitive Environments
— The coverage and connectivity problem in sensor networks has received significant attention of the research community in the recent years. In this paper, we study this problem...
Arunabha Sen, Nibedita Das, Ling Zhou, Bao Hong Sh...
ALENEX
2007
102views Algorithms» more  ALENEX 2007»
13 years 9 months ago
Linearization: Locally Self-Stabilizing Sorting in Graphs
We consider the problem of designing a distributed algorithm that, given an arbitrary connected graph G of nodes with unique labels, converts G into a sorted list of nodes. This a...
Melih Onus, Andréa W. Richa, Christian Sche...
JAL
2007
95views more  JAL 2007»
13 years 7 months ago
Computing shortest paths with uncertainty
Abstract. We consider the problem of estimating the length of a shortest path in a DAG whose edge lengths are known only approximately but can be determined exactly at a cost. Init...
Tomás Feder, Rajeev Motwani, Liadan O'Calla...
ISAAC
2010
Springer
277views Algorithms» more  ISAAC 2010»
13 years 5 months ago
Induced Subgraph Isomorphism on Interval and Proper Interval Graphs
The Induced Subgraph Isomorphism problem on two input graphs G and H is to decide whether G has an induced subgraph isomorphic to H. Already for the restricted case where H is a c...
Pinar Heggernes, Daniel Meister, Yngve Villanger