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BMCBI
2007
137views more  BMCBI 2007»
13 years 6 months ago
Bayesian refinement of protein functional site matching
Background: Matching functional sites is a key problem for the understanding of protein function and evolution. The commonly used graph theoretic approach, and other related appro...
Kanti V. Mardia, Vysaul B. Nyirongo, Peter J. Gree...
EUROSYS
2006
ACM
14 years 3 months ago
Ferret: a toolkit for content-based similarity search of feature-rich data
Building content-based search tools for feature-rich data has been a challenging problem because feature-rich data such as audio recordings, digital images, and sensor data are in...
Qin Lv, William Josephson, Zhe Wang, Moses Charika...
CORR
2010
Springer
157views Education» more  CORR 2010»
13 years 6 months ago
Efficient Clustering with Limited Distance Information
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model ...
Konstantin Voevodski, Maria-Florina Balcan, Heiko ...
BMCBI
2007
156views more  BMCBI 2007»
13 years 6 months ago
Accuracy of structure-based sequence alignment of automatic methods
Background: Accurate sequence alignments are essential for homology searches and for building three-dimensional structural models of proteins. Since structure is better conserved ...
Changhoon Kim, Byungkook Lee
KAIS
2000
87views more  KAIS 2000»
13 years 6 months ago
An Index Structure for Data Mining and Clustering
Abstract. In this paper we present an index structure, called MetricMap, that takes a set of objects and a distance metric and then maps those objects to a k-dimensional space in s...
Xiong Wang, Jason Tsong-Li Wang, King-Ip Lin, Denn...