ibe an abstract data model of protein structures by representing the geometry of proteins using spatial data types and present a framework for fast structural similarity search bas...
We present a multi-dimensional indexing approach for fast sequence similarity search in DNA and protein databases. In particular, we propose effective transformations of subsequen...
Background: Protein function is often dependent on subsets of solvent-exposed residues that may exist in a similar three-dimensional configuration in non homologous proteins thus ...
Background: The rapid development of structural genomics has resulted in many "unknown function" proteins being deposited in Protein Data Bank (PDB), thus, the functiona...
Widespread interest in time-series similarity search has made more in need of efficient technique, which can reduce dimensionality of the data and then to index it easily using a ...