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ISMB
1997
13 years 11 months ago
Automated Alignment of RNA Sequences to Pseudoknotted Structures
Seq7 is a newprogramfor generating multiple structure-based alignments of RNAsequences. Byusing a variant of Dijkstra’s algorithm to find the shortest path through a specially c...
Jack E. Tabaska, Gary D. Stormo
JDA
2010
122views more  JDA 2010»
13 years 4 months ago
Subexponential parameterized algorithms for degree-constrained subgraph problems on planar graphs
We present subexponential parameterized algorithms on planar graphs for a family of problems of the following shape: given a graph, find a connected (induced) subgraph with bounde...
Ignasi Sau, Dimitrios M. Thilikos
VLSID
2008
IEEE
153views VLSI» more  VLSID 2008»
14 years 10 months ago
Total Power Minimization in Glitch-Free CMOS Circuits Considering Process Variation
Compared to subthreshold leakage, dynamic power is normally much less sensitive to the process variation due to its approximately linear relation to the process parameters. Howeve...
Yuanlin Lu, Vishwani D. Agrawal
IPCCC
2006
IEEE
14 years 4 months ago
Risk reduction based survivable WDM network design
— This paper presents an investment strategy to reduce the risk associated with failures in Wavelength Division Multiplexing (WDM) optical networks. The investment strategy deter...
K. Vajanapoom, David Tipper
CAV
2005
Springer
99views Hardware» more  CAV 2005»
14 years 3 months ago
Model Checking x86 Executables with CodeSurfer/x86 and WPDS++
This paper presents a toolset for model checking x86 executables. The members of the toolset are CodeSurfer/x86, WPDS++, and the Path Inspector. CodeSurfer/x86 is used to extract a...
Gogul Balakrishnan, Thomas W. Reps, Nicholas Kidd,...