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BIOINFORMATICS
2011
13 years 17 days ago
libfbi: a C++ implementation for fast box intersection and application to sparse mass spectrometry data
Abstract. This document is a preprint of the following publication: Bioinformatics (2011) 27(8): 1166-1167. Algorithms for sparse data require fast search and subset selection capa...
Marc Kirchner, Buote Xu, Hanno Steen, Judith A. J....
BIOINFORMATICS
2011
13 years 17 days ago
ProDy: Protein Dynamics Inferred from Theory and Experiments
Summary: We developed a Python package, ProDy, for structurebased analysis of protein dynamics. ProDy allows for quantitative characterization of structural variations in heteroge...
Ahmet Bakan, Lidio M. Meireles, Ivet Bahar
BMCBI
2011
13 years 17 days ago
Determinants of Antigenicity and Specificity in immune response for Protein Sequences
Background: Target specific antibodies are pivotal for the design of vaccines, immunodiagnostic tests, studies on proteomics for cancer biomarker discovery, identification of prot...
Yulong Wang, Wenjun Wu, Nicolas N. Negre, Kevin P....
EWC
2011
112views more  EWC 2011»
13 years 14 days ago
CAD-integrated analysis of 3-D beams: a surface-integration approach
1 Most engineering artifacts are designed and analyzed2 today within a 3-D computer aided design (CAD)3 environment. However, slender objects such as beams are4 designed in a 3-D e...
Wa'el Abdel Samad, Krishnan Suresh
GECCO
2011
Springer
374views Optimization» more  GECCO 2011»
13 years 13 days ago
A hybrid heuristic approach for solving the generalized traveling salesman problem
The generalized traveling salesman problem (GTSP) is an NPhard problem that extends the classical traveling salesman problem by partitioning the nodes into clusters and looking fo...
Petrica C. Pop, Serban Iordache
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