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    BMCBI
    2007
    99views more  BMCBI 2007»
    The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
    13 years 9 months ago
    The Deuterator: software for the determination of backbone amide deuterium levels from H/D exchange MS data
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    Background: The combination of mass spectrometry and solution phase amide hydrogen/deuterium exchange (H/D exchange) experiments is an effective method for characterizing protein ...
    B. D. Pascal, M. J. Chalmers, S. A. Busby, C. C. M...
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    BMCBI
    2008
    130views more  BMCBI 2008»
    A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
    13 years 9 months ago
    A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
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    Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
    Sheila Podell, Terry Gaasterland, Eric E. Allen
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    BMCBI
    2007
    146views more  BMCBI 2007»
    PubMed related articles: a probabilistic topic-based model for content similarity
    13 years 9 months ago
    PubMed related articles: a probabilistic topic-based model for content similarity
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    Background: We present a probabilistic topic-based model for content similarity called pmra that underlies the related article search feature in PubMed. Whether or not a document ...
    Jimmy J. Lin, W. John Wilbur
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    BMCBI
    2008
    128views more  BMCBI 2008»
    Validation of an NSP-based (negative selection pattern) gene family identification strategy
    13 years 9 months ago
    Validation of an NSP-based (negative selection pattern) gene family identification strategy
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    Background: Gene family identification from ESTs can be a valuable resource for analysis of genome evolution but presents unique challenges in organisms for which the entire genom...
    Ronald L. Frank, Cyriac Kandoth, Fikret Erç...
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    BMCBI
    2008
    156views more  BMCBI 2008»
    ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
    13 years 9 months ago
    ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
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    Background: A survey of microarray databases reveals that most of the repository contents and data models are heterogeneous (i.e., data obtained from different chip manufacturers)...
    Todd H. Stokes, J. T. Torrance, Henry Li, May D. W...
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