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» Association Analysis Techniques for Bioinformatics Problems
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SADM
2008
178views more  SADM 2008»
13 years 7 months ago
Fast Projection-Based Methods for the Least Squares Nonnegative Matrix Approximation Problem
: Nonnegative matrix approximation (NNMA) is a popular matrix decomposition technique that has proven to be useful across a diverse variety of fields with applications ranging from...
Dongmin Kim, Suvrit Sra, Inderjit S. Dhillon
DAC
2000
ACM
14 years 8 months ago
Forensic engineering techniques for VLSI CAD tools
The proliferation of the Internet has a ected the business model of almost all semiconductor and VLSI CAD companies that rely on intellectual property (IP) as their main source of...
Darko Kirovski, David T. Liu, Jennifer L. Wong, Mi...
BMCBI
2008
77views more  BMCBI 2008»
13 years 7 months ago
SeqAn An efficient, generic C++ library for sequence analysis
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...
Andreas Döring, David Weese, Tobias Rausch, K...
JMLR
2012
11 years 10 months ago
Structured Sparse Canonical Correlation Analysis
In this paper, we propose to apply sparse canonical correlation analysis (sparse CCA) to an important genome-wide association study problem, eQTL mapping. Existing sparse CCA mode...
Xi Chen, Han Liu, Jaime G. Carbonell
BMCBI
2008
178views more  BMCBI 2008»
13 years 7 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...