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BMCBI
2007
130views more  BMCBI 2007»
15 years 6 months ago
Exploiting residue-level and profile-level interface propensities for usage in binding sites prediction of proteins
Background: Recognition of binding sites in proteins is a direct computational approach to the characterization of proteins in terms of biological and biochemical function. Residu...
Qiwen Dong, Xiaolong Wang, Lei Lin, Yi Guan
BMCBI
2008
154views more  BMCBI 2008»
15 years 6 months ago
Extension of the COG and arCOG databases by amino acid and nucleotide sequences
Background: The current versions of the COG and arCOG databases, both excellent frameworks for studies in comparative and functional genomics, do not contain the nucleotide sequen...
Florian Meereis, Michael Kaufmann
BMCBI
2008
127views more  BMCBI 2008»
15 years 6 months ago
AMMO-Prot: amine system project 3D-model finder
Background: Amines are biogenic amino acid derivatives, which play pleiotropic and very important yet complex roles in animal physiology. For many other relevant biomolecules, bio...
Ismael Navas Delgado, Raúl Montañez,...
CCR
2008
76views more  CCR 2008»
15 years 6 months ago
WebClass: adding rigor to manual labeling of traffic anomalies
Despite the flurry of anomaly-detection papers in recent years, effective ways to validate and compare proposed solutions have remained elusive. We argue that evaluating anomaly d...
Haakon Ringberg, Augustin Soule, Jennifer Rexford
ENTCS
2006
128views more  ENTCS 2006»
15 years 6 months ago
Web Verification: Perspective and Challenges
The Web poses novel and interesting problems for both programming language design and verification--and their intersection. This paper provides a personal outline of one thread of...
Shriram Krishnamurthi