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BMCBI
2010
122views more  BMCBI 2010»
15 years 6 months ago
An overview of the CellML API and its implementation
Background: CellML is an XML based language for representing mathematical models, in a machine-independent form which is suitable for their exchange between different authors, and...
Andrew K. Miller, Justin Marsh, Adam Reeve, Alan G...
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BMCBI
2008
102views more  BMCBI 2008»
15 years 6 months ago
Monitoring the evolutionary aspect of the Gene Ontology to enhance predictability and usability
Background: Much effort is currently made to develop the Gene Ontology (GO). Due to the dynamic nature of information it addresses, GO undergoes constant updates whose results are...
Jong C. Park, Tak-eun Kim, Jinah Park
BIOINFORMATICS
2006
124views more  BIOINFORMATICS 2006»
15 years 6 months ago
Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Neil D. Lawrence, Magnus Rattra...
BMCBI
2007
131views more  BMCBI 2007»
15 years 6 months ago
Prediction of peptides observable by mass spectrometry applied at the experimental set level
Background: When proteins are subjected to proteolytic digestion and analyzed by mass spectrometry using a method such as 2D LC MS/MS, only a portion of the proteotypic peptides a...
William S. Sanders, Susan M. Bridges, Fiona M. McC...
FSS
2006
140views more  FSS 2006»
15 years 6 months ago
Advances and challenges in interval-valued fuzzy logic
Among the various extensions to the common [0, 1]-valued truth degrees of "traditional" fuzzy set theory, closed intervals of [0, 1] stand out as a particularly appealin...
Chris Cornelis, Glad Deschrijver, Etienne E. Kerre