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BMCBI
2008
135views more  BMCBI 2008»
13 years 8 months ago
Inferring the role of transcription factors in regulatory networks
Background: Expression profiles obtained from multiple perturbation experiments are increasingly used to reconstruct transcriptional regulatory networks, from well studied, simple...
Philippe Veber, Carito Guziolowski, Michel Le Borg...
BMCBI
2007
141views more  BMCBI 2007»
13 years 8 months ago
Using structural motif descriptors for sequence-based binding site prediction
Background: Many protein sequences are still poorly annotated. Functional characterization of a protein is often improved by the identification of its interaction partners. Here, ...
Andreas Henschel, Christof Winter, Wan Kyu Kim, Mi...
PC
2010
190views Management» more  PC 2010»
13 years 6 months ago
High-performance cone beam reconstruction using CUDA compatible GPUs
Compute unified device architecture (CUDA) is a software development platform that allows us to run C-like programs on the nVIDIA graphics processing unit (GPU). This paper prese...
Yusuke Okitsu, Fumihiko Ino, Kenichi Hagihara
WINET
2010
97views more  WINET 2010»
13 years 6 months ago
Routing in the frequency domain
Abstract The design of single transceiver based multichannel multi-hop wireless mesh networks focuses on the trade-off between rapid neighbor synchronization and maximizing the usa...
Jay A. Patel, Haiyun Luo, Indranil Gupta
BMCBI
2011
13 years 2 months ago
PICS-Ord: Unlimited Coding of Ambiguous Regions by Pairwise Identity and Cost Scores Ordination
Background: We present a novel method to encode ambiguously aligned regions in fixed multiple sequence alignments by ‘Pairwise Identity and Cost Scores Ordination’ (PICS-Ord)....
Robert K. Luecking, Brendan P. Hodkinson, Alexandr...