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BMCBI
2007
129views more  BMCBI 2007»
13 years 7 months ago
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
Background: Incorrectly annotated sequence data are becoming more commonplace as databases increasingly rely on automated techniques for annotation. Hence, there is an urgent need...
Carson M. Andorf, Drena Dobbs, Vasant Honavar
ASPLOS
2011
ACM
12 years 11 months ago
Sponge: portable stream programming on graphics engines
Graphics processing units (GPUs) provide a low cost platform for accelerating high performance computations. The introduction of new programming languages, such as CUDA and OpenCL...
Amir Hormati, Mehrzad Samadi, Mark Woh, Trevor N. ...
SAC
2011
ACM
12 years 10 months ago
Type harvesting: a practical approach to obtaining typing information in dynamic programming languages
Dynamically typed programming languages are powerful tools for rapid software development. However, there are scenarios that would benefit from actual type information being avai...
Michael Haupt, Michael Perscheid, Robert Hirschfel...
WWW
2008
ACM
14 years 8 months ago
Modeling online reviews with multi-grain topic models
In this paper we present a novel framework for extracting the ratable aspects of objects from online user reviews. Extracting such aspects is an important challenge in automatical...
Ivan Titov, Ryan T. McDonald
JIB
2007
172views more  JIB 2007»
13 years 7 months ago
The ABC (Analysing Biomolecular Contacts)-database
As protein-protein interactions are one of the basic mechanisms in most cellular processes, it is desirable to understand the molecular details of protein-protein contacts and ult...
Peter Walter, Sam Ansari, Volkhard Helms