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EPEW
2005
Springer
14 years 1 months ago
Hypergraph Partitioning for Faster Parallel PageRank Computation
The PageRank algorithm is used by search engines such as Google to order web pages. It uses an iterative numerical method to compute the maximal eigenvector of a transition matrix ...
Jeremy T. Bradley, Douglas V. de Jager, William J....
ESA
2004
Springer
145views Algorithms» more  ESA 2004»
14 years 1 months ago
Flows on Few Paths: Algorithms and Lower Bounds
Abstract. Classical network flow theory allows decomposition of flow into several chunks of arbitrary sizes traveling through the network on different paths. In the first part ...
Maren Martens, Martin Skutella
PVM
2010
Springer
13 years 6 months ago
Toward Performance Models of MPI Implementations for Understanding Application Scaling Issues
Abstract. Designing and tuning parallel applications with MPI, particularly at large scale, requires understanding the performance implications of different choices of algorithms ...
Torsten Hoefler, William Gropp, Rajeev Thakur, Jes...
RECOMB
2006
Springer
14 years 8 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger
NIPS
2004
13 years 9 months ago
Hierarchical Eigensolver for Transition Matrices in Spectral Methods
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
Chakra Chennubhotla, Allan D. Jepson