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    CANDC
    2008
    ACM
    94views Emerging Technology» more  CANDC 2008»
    'Genome order index' should not be used for defining compositional constraints in nucleotide sequences
    13 years 9 months ago
    'Genome order index' should not be used for defining compositional constraints in nucleotide sequences
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    Background: The Z-curve is a three dimensional representation of DNA sequences proposed over a decade ago and has been extensively applied to sequence segmentation, horizontal gen...
    Eran Elhaik, Dan Graur, Kresimir Josic
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    BMCBI
    2006
    111views more  BMCBI 2006»
    High throughput profile-profile based fold recognition for the entire human proteome
    13 years 9 months ago
    High throughput profile-profile based fold recognition for the entire human proteome
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    Background: In order to maintain the most comprehensive structural annotation databases we must carry out regular updates for each proteome using the latest profile-profile fold r...
    Liam J. McGuffin, Richard T. Smith, Kevin Bryson, ...
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    BMCBI
    2007
    141views more  BMCBI 2007»
    On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common
    13 years 9 months ago
    On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common
    Download  www.biomedcentral.com
    Background: The lysine, threonine, and methionine biosynthetic pathways share the three initial enzymatic steps, which are referred to as the Common Pathway (CP). In Escherichia c...
    Marco Fondi, Matteo Brilli, Renato Fani
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    BMCBI
    2007
    115views more  BMCBI 2007»
    A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector
    13 years 9 months ago
    A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector
    Download  www.biomedcentral.com
    Background: Hidden Markov Models (HMMs) provide an excellent means for structure identification and feature extraction on stochastic sequential data. An HMM-with-Duration (HMMwD) ...
    Stephen Winters-Hilt, Carl Baribault
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    NAR
    2008
    204views more  NAR 2008»
    ppdb: a plant promoter database
    13 years 9 months ago
    ppdb: a plant promoter database
    Download  www1.gifu-u.ac.jp
    ppdb (http://www.ppdb.gene.nagoya-u.ac.jp) is a plant promoter database that provides promoter annotation of Arabidopsis and rice. The database contains information on promoter st...
    Yoshiharu Y. Yamamoto, Junichi Obokata
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