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BMCBI
2008
140views more  BMCBI 2008»
13 years 8 months ago
FUNYBASE: a FUNgal phYlogenomic dataBASE
Background: The increasing availability of fungal genome sequences provides large numbers of proteins for evolutionary and phylogenetic analyses. However the heterogeneity of data...
Sylvain Marthey, Gabriela Aguileta, Françoi...
BMCBI
2007
165views more  BMCBI 2007»
13 years 8 months ago
Direct maximum parsimony phylogeny reconstruction from genotype data
Background: Maximum parsimony phylogenetic tree reconstruction from genetic variation data is a fundamental problem in computational genetics with many practical applications in p...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
SIAMDM
2010
194views more  SIAMDM 2010»
13 years 3 months ago
Combinatorics and Geometry of Finite and Infinite Squaregraphs
Abstract. Squaregraphs were originally defined as finite plane graphs in which all inner faces are quadrilaterals (i.e., 4-cycles) and all inner vertices (i.e., the vertices not in...
Hans-Jürgen Bandelt, Victor Chepoi, David Epp...
MOBISYS
2004
ACM
14 years 8 months ago
Exponential Index: A Parameterized Distributed Indexing Scheme for Data on Air
Wireless data broadcast has received a lot of attention from industries and academia in recent years. Access efficiency and energy conservation are two critical performance concer...
Jianliang Xu, Wang-Chien Lee, Xueyan Tang
PPOPP
2010
ACM
14 years 5 months ago
A distributed placement service for graph-structured and tree-structured data
Effective data placement strategies can enhance the performance of data-intensive applications implemented on high end computing clusters. Such strategies can have a significant i...
Gregory Buehrer, Srinivasan Parthasarathy, Shirish...