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BMCBI
2004
125views more  BMCBI 2004»
13 years 7 months ago
A fast algorithm for determining the best combination of local alignments to a query sequence
Background: Existing sequence alignment algorithms assume that similarities between DNA or amino acid sequences are linearly ordered. That is, stretches of similar nucleotides or ...
Gavin C. Conant, Andreas Wagner
ICES
2010
Springer
148views Hardware» more  ICES 2010»
13 years 5 months ago
HyperNEAT for Locomotion Control in Modular Robots
Abstract. In an application where autonomous robots can amalgamate spontaneously into arbitrary organisms, the individual robots cannot know a priori at which location in an organi...
Evert Haasdijk, Andrei A. Rusu, A. E. Eiben
FCCM
2011
IEEE
311views VLSI» more  FCCM 2011»
12 years 11 months ago
String Matching in Hardware Using the FM-Index
—String matching is a ubiquitous problem that arises in a wide range of applications in computing, e.g., packet routing, intrusion detection, web querying, and genome analysis. D...
Edward Fernandez, Walid Najjar, Stefano Lonardi
NAR
2011
221views Computer Vision» more  NAR 2011»
12 years 10 months ago
AGRIS: the Arabidopsis Gene Regulatory Information Server, an update
The Arabidopsis Gene Regulatory Information Server (AGRIS; http://arabidopsis.med.ohio-state .edu/) provides a comprehensive resource for gene regulatory studies in the model plan...
Alper Yilmaz, Maria Katherine Mejia-Guerra, Kyle K...
BMCBI
2010
161views more  BMCBI 2010»
13 years 7 months ago
CGHpower: exploring sample size calculations for chromosomal copy number experiments
Background: Determining a suitable sample size is an important step in the planning of microarray experiments. Increasing the number of arrays gives more statistical power, but ad...
Ilari Scheinin, Jose A. Ferreira, Sakari Knuutila,...