Sciweavers

40 search results - page 1 / 8
» BayesMD: Flexible Biological Modeling for Motif Discovery
Sort
View
JCB
2008
159views more  JCB 2008»
13 years 6 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
ICDE
2010
IEEE
750views Database» more  ICDE 2010»
13 years 11 months ago
Efficient and accurate discovery of patterns in sequence datasets
Existing sequence mining algorithms mostly focus on mining for subsequences. However, a large class of applications, such as biological DNA and protein motif mining, require effici...
Avrilia Floratou, Sandeep Tata, Jignesh M. Patel
RECOMB
2005
Springer
14 years 7 months ago
Motif Discovery Through Predictive Modeling of Gene Regulation
Manuel Middendorf, Anshul Kundaje, Mihir Shah, Yoa...
ALMOB
2006
138views more  ALMOB 2006»
13 years 6 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
BMCBI
2007
190views more  BMCBI 2007»
13 years 7 months ago
Discriminative motif discovery in DNA and protein sequences using the DEME algorithm
Background: Motif discovery aims to detect short, highly conserved patterns in a collection of unaligned DNA or protein sequences. Discriminative motif finding algorithms aim to i...
Emma Redhead, Timothy L. Bailey