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JCB
2000
107views more  JCB 2000»
13 years 10 months ago
A Discriminative Framework for Detecting Remote Protein Homologies
A new method for detecting remote protein homologies is introduced and shown to perform well in classifying protein domains by SCOP superfamily. The method is a variant of support...
Tommi Jaakkola, Mark Diekhans, David Haussler
RECOMB
2002
Springer
14 years 11 months ago
A bayesian approach to transcript estimation from gene array data: the BEAM technique
We present a new statistically optimal approach to estimate transcript levels and ratios from one or more gene array experiments. The Bayesian Estimation of Array Measurements (BE...
Ron O. Dror, Jonathan G. Murnick, Nicola A. Rinald...
BMCBI
2010
138views more  BMCBI 2010»
13 years 11 months ago
Amino acid classification based spectrum kernel fusion for protein subnuclear localization
Background: Prediction of protein localization in subnuclear organelles is more challenging than general protein subcelluar localization. There are only three computational models...
Suyu Mei, Wang Fei
CSDA
2010
194views more  CSDA 2010»
13 years 11 months ago
A clipped latent variable model for spatially correlated ordered categorical data
We propose a model for a point-referenced spatially correlated ordered categorical response and methodology for estimation of model parameters. Models and methods for spatially co...
Megan Dailey Higgs, Jennifer A. Hoeting
UAI
2008
14 years 12 days ago
The Phylogenetic Indian Buffet Process: A Non-Exchangeable Nonparametric Prior for Latent Features
Nonparametric Bayesian models are often based on the assumption that the objects being modeled are exchangeable. While appropriate in some applications (e.g., bag-ofwords models f...
Kurt T. Miller, Thomas L. Griffiths, Michael I. Jo...