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RECOMB
2008
Springer
14 years 10 months ago
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins
Abstract. In engineering protein variants by constructing and screening combinatorial libraries of chimeric proteins, two complementary and competing goals are desired: the new pro...
Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg
RECOMB
2005
Springer
14 years 10 months ago
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations
Background: Most cellular processes are carried out by multi-protein complexes, groups of proteins that bind together to perform a specific task. Some proteins form stable complex...
Elena Zotenko, Katia S. Guimarães, Raja Jot...
RECOMB
2004
Springer
14 years 10 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir
ICFP
2002
ACM
14 years 9 months ago
Meta-programming with names and necessity
Meta-programming is a discipline of writing programs in a certain programming language that generate, manipulate or execute programs written in another language. In a typed settin...
Aleksandar Nanevski
MOBIHOC
2003
ACM
14 years 9 months ago
Topology management in ad hoc networks
The efficiency of a communication network depends not only on its control protocols, but also on its topology. We propose a distributed topology management algorithm that construc...
Lichun Bao, J. J. Garcia-Luna-Aceves