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» Better Polynomial Algorithms on Graphs of Bounded Rank-Width
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TIT
2010
170views Education» more  TIT 2010»
13 years 5 months ago
Belief propagation estimation of protein and domain interactions using the sum-product algorithm
We present a novel framework to estimate protein-protein (PPI) and domain-domain (DDI) interactions based on a belief propagation estimation method that efficiently computes inter...
Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale ...
JGAA
2007
142views more  JGAA 2007»
13 years 10 months ago
Approximation Algorithms for the Maximum Induced Planar and Outerplanar Subgraph Problems
The task of finding the largest subset of vertices of a graph that induces a planar subgraph is known as the Maximum Induced Planar Subgraph problem (MIPS). In this paper, some n...
Kerri Morgan, Graham Farr
ESA
2005
Springer
114views Algorithms» more  ESA 2005»
14 years 4 months ago
Unbalanced Graph Cuts
We introduce the Minimum-size bounded-capacity cut (MinSBCC) problem, in which we are given a graph with an identified source and seek to find a cut minimizing the number of node...
Ara Hayrapetyan, David Kempe, Martin Pál, Z...
SODA
2012
ACM
253views Algorithms» more  SODA 2012»
12 years 1 months ago
Kernelization of packing problems
Kernelization algorithms are polynomial-time reductions from a problem to itself that guarantee their output to have a size not exceeding some bound. For example, d-Set Matching f...
Holger Dell, Dániel Marx
STOC
2010
ACM
224views Algorithms» more  STOC 2010»
14 years 3 months ago
Satisfiability Allows No Nontrivial Sparsification Unless The Polynomial-Time Hierarchy Collapses
Consider the following two-player communication process to decide a language L: The first player holds the entire input x but is polynomially bounded; the second player is computa...
Holger Dell and Dieter van Melkebeek