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    ICPP
    2006
    IEEE
    175views Distributed And Parallel Com...» more  ICPP 2006»
    Data-Flow Analysis for MPI Programs
    14 years 2 months ago
    Data-Flow Analysis for MPI Programs
    Download  openanalysis.berlios.de
    Message passing via MPI is widely used in singleprogram, multiple-data (SPMD) parallel programs. Existing data-flow frameworks do not model the semantics of message-passing SPMD ...
    Michelle Mills Strout, Barbara Kreaseck, Paul D. H...
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    RECOMB
    2003
    Springer
    157views Computational Biology» more  RECOMB 2003»
    Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals
    14 years 9 months ago
    Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals
    Download  web.mit.edu
    We propose a framework for modeling sequence motifs based on the maximum entropy principle (MEP). We recommend approximating short sequence motif distributions with the maximum en...
    Gene W. Yeo, Christopher B. Burge
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    BMCBI
    2010
    167views more  BMCBI 2010»
    BisoGenet: a new tool for gene network building, visualization and analysis
    13 years 9 months ago
    BisoGenet: a new tool for gene network building, visualization and analysis
    Download  www.biomedcentral.com
    Background: The increasing availability and diversity of omics data in the post-genomic era offers new perspectives in most areas of biomedical research. Graph-based biological ne...
    Alexander Martin, Maria Elena Ochagavia, Laya C. R...
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    BMCBI
    2008
    103views more  BMCBI 2008»
    TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
    13 years 9 months ago
    TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
    Download  www.biomedcentral.com
    Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
    Mallika Veeramalai, Yuzhen Ye, Adam Godzik
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    BMCBI
    2008
    178views more  BMCBI 2008»
    Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
    13 years 9 months ago
    Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
    Download  www.biomedcentral.com
    Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
    Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
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