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BIOINFORMATICS
2006
63views more  BIOINFORMATICS 2006»
13 years 11 months ago
BioThesaurus: a web-based thesaurus of protein and gene names
Hongfang Liu, Zhang-Zhi Hu, Jian Zhang, Cathy H. W...
BMCBI
2008
85views more  BMCBI 2008»
13 years 11 months ago
Normalizing biomedical terms by minimizing ambiguity and variability
Background: One of the difficulties in mapping biomedical named entities, e.g. genes, proteins, chemicals and diseases, to their concept identifiers stems from the potential varia...
Yoshimasa Tsuruoka, John McNaught, Sophia Ananiado...
BMCBI
2007
151views more  BMCBI 2007»
13 years 11 months ago
A comparison study on algorithms of detecting long forms for short forms in biomedical text
Motivation: With more and more research dedicated to literature mining in the biomedical domain, more and more systems are available for people to choose from when building litera...
Manabu Torii, Zhang-Zhi Hu, Min Song, Cathy H. Wu,...
TREC
2003
14 years 6 days ago
Searching for geneRIFs: Concept-Based Query Expansion and Bayes Classification
k gene annotations. Our indexing machinery produces per indexed MEDLINE abstract a list of concepts with an accompanying weight, termed a fingerprint. Searching is done by matching...
Rob Jelier, Martijn J. Schuemie, C. Christiaan van...
BMCBI
2008
147views more  BMCBI 2008»
13 years 11 months ago
Assessment of disease named entity recognition on a corpus of annotated sentences
Background: In recent years, the recognition of semantic types from the biomedical scientific literature has been focused on named entities like protein and gene names (PGNs) and ...
Antonio Jimeno-Yepes, Ernesto Jiménez-Ruiz,...