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» Bioinformatics Adventures in Database Research
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NAR
2011
215views Computer Vision» more  NAR 2011»
12 years 10 months ago
LSD: a leaf senescence database
By broad literature survey, we have developed a leaf senescence database (LSD, http://www .eplantsenescence.org/) that contains a total of 1145 senescence associated genes (SAGs) ...
Xiao-Chuan Liu, Zhonghai Li, Zhiqiang Jiang, Yi Zh...
CSB
2005
IEEE
131views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Current Challenges in Bioimage Database Design
Information technology research has played a significant role in the high-throughput acquisition and analysis of biological information. The tremendous amount of information gath...
Ambuj K. Singh, Arnab Bhattacharya, Vebjorn Ljosa
CSB
2004
IEEE
142views Bioinformatics» more  CSB 2004»
13 years 11 months ago
FastR: Fast Database Search Tool for Non-Coding RNA
The discovery of novel non-coding RNAs has been among the most exciting recent developments in Biology. Yet, many more remain undiscovered. It has been hypothesized that there is ...
Vineet Bafna, Shaojie Zhang
CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
14 years 1 months ago
On Optimizing Distance-Based Similarity Search for Biological Databases
Similarity search leveraging distance-based index structures is increasingly being used for both multimedia and biological database applications. We consider distance-based indexi...
Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen N...
SISAP
2008
IEEE
166views Data Mining» more  SISAP 2008»
14 years 2 months ago
Approximate Similarity Search in Genomic Sequence Databases Using Landmark-Guided Embedding
Similarity search in sequence databases is of paramount importance in bioinformatics research. As the size of the genomic databases increases, similarity search of proteins in the...
Ahmet Sacan, Ismail Hakki Toroslu