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» Bioinformatics Adventures in Database Research
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BMCBI
2005
111views more  BMCBI 2005»
13 years 7 months ago
Improving interoperability between microbial information and sequence databases
Background: Biological resources are essential tools for biomedical research. Their availability is promoted through on-line catalogues. Common Access to Biological Resources and ...
Paolo Romano, Peter Dawyndt, Francesca Piersigilli...
BMCBI
2010
155views more  BMCBI 2010»
13 years 7 months ago
FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases
Background: Whole genome association studies using highly dense single nucleotide polymorphisms (SNPs) are a set of methods to identify DNA markers associated with variation in a ...
Stephen J. Goodswen, Cedric Gondro, Nathan S. Wats...
DILS
2005
Springer
14 years 1 months ago
Support for BioIndexing in BLASTgres
The ability to perform genome-wide and cross-genome data analyses can dramatically reduce the time required for new biological discoveries. This raises important issues in bioinfor...
Ruey-Lung Hsiao, Douglas Stott Parker Jr., Hung-ch...
CAISE
2003
Springer
14 years 26 days ago
Exp-DB: Fast Development of Information Systems for Experiment Tracking
Bioinformatics research groups require information systems keeping track of experiments and their results. However, current solutions are often ad-hoc, difficult to maintain, exten...
Nomair A. Naeem, Stéphane Raymond, Anne Pou...
BMCBI
2010
112views more  BMCBI 2010»
13 years 7 months ago
TabSQL: a MySQL tool to facilitate mapping user data to public databases
Background: With advances in high-throughput genomics and proteomics, it is challenging for biologists to deal with large data files and to map their data to annotations in public...
Xiaoqin Xia, Michael McClelland, Yipeng Wang