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GECCO
2004
Springer
150views Optimization» more  GECCO 2004»
14 years 3 months ago
Systems Biology Modeling in Human Genetics Using Petri Nets and Grammatical Evolution
Understanding the hierarchical relationships among biochemical, metabolic, and physiological systems in the mapping between genotype and phenotype is expected to improve the diagno...
Jason H. Moore, Lance W. Hahn
RP
2009
Springer
136views Control Systems» more  RP 2009»
14 years 4 months ago
Probabilistic Model Checking of Biological Systems with Uncertain Kinetic Rates
We present an abstraction of the probabilistic semantics of Multiset Rewriting to formally express systems of reactions with uncertain kinetic rates. This allows biological systems...
Roberto Barbuti, Francesca Levi, Paolo Milazzo, Gu...
SSDBM
1999
IEEE
86views Database» more  SSDBM 1999»
14 years 2 months ago
A Query System in a Biological Database
In this paper, we present a query system that has been implemented in a practical biological database - GPCRDB. Distinguishing features of this system include: smart query relaxat...
Dunren Che, Yangjun Chen, Karl Aberer
SIGMETRICS
2008
ACM
130views Hardware» more  SIGMETRICS 2008»
13 years 9 months ago
Using probabilistic model checking in systems biology
Probabilistic model checking is a formal verification framework for systems which exhibit stochastic behaviour. It has been successfully applied to a wide range of domains, includ...
Marta Z. Kwiatkowska, Gethin Norman, David Parker
POPL
2008
ACM
14 years 10 months ago
Systems biology, models, and concurrency
Models will play a central role in the representation, storage, manipulation, and communication of knowledge in systems biology. Models capable of fulfilling such a role will like...
Walter Fontana