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» Biological information as set-based complexity
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ANSS
2007
IEEE
14 years 4 months ago
Evaluating the Design of Biological Cells Using a Computer Workbench
For embedded systems as well as for biological cell systems, design is a feature that defines their identity. The assembly of different components in designs of both systems can ...
Tessa E. Pronk, Simon Polstra, Andy D. Pimentel, T...
CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
14 years 3 months ago
iSimBioSys: An "In Silico" Discrete Event Simulation Framework for Modeling Biological Systems
The genome projects have provided comprehensive information about the basic building blocks of life. The next challenge is to understand how biological functions emerge from compl...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...
BIOCOMP
2007
13 years 11 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ...
Xuehui Li, Tamer Kahveci
BMCBI
2004
144views more  BMCBI 2004»
13 years 9 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...
BMCBI
2008
130views more  BMCBI 2008»
13 years 10 months ago
FAF-Drugs2: Free ADME/tox filtering tool to assist drug discovery and chemical biology projects
Background: Drug discovery and chemical biology are exceedingly complex and demanding enterprises. In recent years there are been increasing awareness about the importance of pred...
David Lagorce, Olivier Sperandio, Hervé Gal...