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» Biological information as set-based complexity
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IANDC
2011
148views more  IANDC 2011»
13 years 5 months ago
Building species trees from larger parts of phylogenomic databases
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
JCNS
2011
87views more  JCNS 2011»
13 years 5 months ago
Information-geometric measure of 3-neuron firing patterns characterizes scale-dependence in cortical networks
To understand the functional connectivity of neural networks, it is important to develop simple and incisive descriptors of multineuronal firing patterns. Analysis at the pairwise...
Ifije E. Ohiorhenuan, Jonathan D. Victor
BMCBI
2007
166views more  BMCBI 2007»
13 years 10 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
IVS
2007
110views more  IVS 2007»
13 years 10 months ago
An automated approach for the optimization of pixel-based visualizations
During the last two decades, a wide variety of advanced methods for the visual exploration of large data sets have been proposed. For most of these techniques user interaction has...
Jörn Schneidewind, Mike Sips, Daniel A. Keim
SC
2009
ACM
14 years 4 months ago
Evaluating use of data flow systems for large graph analysis
Large graph analysis has become increasingly important and is widely used in many applications such as web mining, social network analysis, biology, and information retrieval. The...
Andy Yoo, Ian Kaplan