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» Biological pathway inference using manifold embedding
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ICPR
2006
IEEE
14 years 8 months ago
Object Tracking Using Globally Coordinated Nonlinear Manifolds
We present a dynamic inference algorithm in a globally parameterized nonlinear manifold and demonstrate it on the problem of visual tracking. An appearance manifold is usually non...
Che-Bin Liu, Ming-Hsuan Yang, Narendra Ahuja, Ruei...
IV
2008
IEEE
296views Visualization» more  IV 2008»
14 years 1 months ago
Revealing Subnetwork Roles using Contextual Visualization: Comparison of Metabolic Networks
This article is addressing a recurrent problem in biology: mining newly built large scale networks. Our approach consists in comparing these new networks to well known ones. The v...
Romain Bourqui, Fabien Jourdan
BMCBI
2006
103views more  BMCBI 2006»
13 years 7 months ago
Meta-All: a system for managing metabolic pathway information
Background: Many attempts are being made to understand biological subjects at a systems level. A major resource for these approaches are biological databases, storing manifold inf...
Stephan Weise, Ivo Grosse, Christian Klukas, Dirk ...
BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical
Background: In accordance with the increasing amount of information concerning individual differences in drug response and molecular interaction, the role of in silico prediction ...
Takeshi Arikuma, Sumi Yoshikawa, Ryuzo Azuma, Kent...
BMCBI
2006
147views more  BMCBI 2006»
13 years 7 months ago
A case study in pathway knowledgebase verification
Background: Biological databases and pathway knowledgebases are proliferating rapidly. We are developing software tools for computer-aided hypothesis design and evaluation, and we...
Stephen A. Racunas, Nigam Shah, Nina V. Fedoroff