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WABI
2009
Springer
181views Bioinformatics» more  WABI 2009»
14 years 4 months ago
Decoding Synteny Blocks and Large-Scale Duplications in Mammalian and Plant Genomes
Abstract. The existing synteny block reconstruction algorithms use anchors (e.g., orthologous genes) shared over all genomes to construct the synteny blocks for multiple genomes. T...
Qian Peng, Max A. Alekseyev, Glenn Tesler, Pavel A...
RTAS
2008
IEEE
14 years 4 months ago
Modular Code Generation from Triggered and Timed Block Diagrams
In previous work we have shown how modular code can be automatically generated from a synchronous block diagram notation where all blocks fire at all times. Here, we extend this ...
Roberto Lublinerman, Stavros Tripakis
DATE
2007
IEEE
56views Hardware» more  DATE 2007»
14 years 4 months ago
Unknown blocking scheme for low control data volume and high observability
This paper presents a new blocking logic to block unknowns for temporal compactors. The proposed blocking logic can reduce data volume required to control the blocking logic and a...
Seongmoon Wang, Wenlong Wei, Srimat T. Chakradhar
HPCC
2007
Springer
14 years 4 months ago
A Block JRS Algorithm for Highly Parallel Computation of SVDs
This paper presents a new algorithm for computing the singular value decomposition (SVD) on multilevel memory hierarchy architectures. This algorithm is based on one-sided JRS iter...
Mostafa I. Soliman, Sanguthevar Rajasekaran, Reda ...
HPDC
2005
IEEE
14 years 3 months ago
Adaptive data block scheduling for parallel TCP streams
Applications that use parallel TCP streams to increase throughput must multiplex and demultiplex data blocks over a set of TCP streams transmitting on one or more network paths. W...
Thomas J. Hacker, Brian D. Noble, Brian D. Athey