222 search results - page 23 / 45 » Boosting Relational Sequence Alignments |
ECCB
2008
IEEE
14 years 1 months ago
2008
IEEE
Motivation: Mapping of remote evolutionary links is a classic computational problem of much interest. Relating protein families allows for functional and structural inference on u...
INTERSPEECH
2010
13 years 2 months ago
2010
We develop a similarity measure to detect repeatedly occurring Out-of-Vocabulary words (OOV), since these carry important information. Sub-word sequences in the recognition output...
CORR
2006
Springer
13 years 7 months ago
2006
Springer
An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A, C, G, U}. The higher structure i...
ICML
2004
IEEE
14 years 8 months ago
2004
IEEE
In this paper, we present a graphical model for protein secondary structure prediction. This model extends segmental semi-Markov models (SSMM) to exploit multiple sequence alignme...
CPM
2001
Springer
13 years 12 months ago
2001
Springer
We present a solution for the following problem. Given two sequences X = x1x2 · · · xn and Y = y1y2 · · · ym, n ≤ m, find the best scoring alignment of X = Xk [i] vs Y ove...