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» Bounds for parametric sequence comparison
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BMCBI
2010
109views more  BMCBI 2010»
13 years 7 months ago
Free energy estimation of short DNA duplex hybridizations
Background: Estimation of DNA duplex hybridization free energy is widely used for predicting cross-hybridizations in DNA computing and microarray experiments. A number of software...
Dan C. Tulpan, Mirela Andronescu, Serge Leger
NIPS
2008
13 years 9 months ago
Scalable Algorithms for String Kernels with Inexact Matching
We present a new family of linear time algorithms based on sufficient statistics for string comparison with mismatches under the string kernels framework. Our algorithms improve t...
Pavel P. Kuksa, Pai-Hsi Huang, Vladimir Pavlovic
SOFSEM
2007
Springer
14 years 1 months ago
A Simple Algorithm for Stable Minimum Storage Merging
We contribute to the research on stable minimum storage merging by introducing an algorithm that is particularly simply structured compared to its competitors. The presented algori...
Pok-Son Kim, Arne Kutzner
CDC
2009
IEEE
149views Control Systems» more  CDC 2009»
13 years 8 months ago
Context-dependent multi-class classification with unknown observation and class distributions with applications to bioinformatic
We consider the multi-class classification problem, based on vector observation sequences, where the conditional (given class observations) probability distributions for each class...
Alex S. Baras, John S. Baras
CAD
2007
Springer
13 years 7 months ago
Boundary of the volume swept by a free-form solid in screw motion
The swept volume of a moving solid is a powerful computational and visualization concept. It provides an excellent aid for path and accessibility planning in robotics and for simu...
Jarek Rossignac, J. J. Kim, S. C. Song, K. C. Suh,...