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» Building a Calculus of Data Structures
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BMCBI
2010
189views more  BMCBI 2010»
13 years 8 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
ICDE
2001
IEEE
115views Database» more  ICDE 2001»
14 years 9 months ago
Incremental Computation and Maintenance of Temporal Aggregates
We consider the problems of computing aggregation queries in temporal databases, and of maintaining materialized temporal aggregate views efficiently. The latter problem is partic...
Jun Yang 0001, Jennifer Widom
VIS
2004
IEEE
138views Visualization» more  VIS 2004»
14 years 9 months ago
Dual Contouring with Topology-Preserving Simplification Using Enhanced Cell Representation
We present a fast, topology-preserving approach for isosurface simplification. The underlying concept behind our approach is to preserve the disconnected surface components in cel...
Nan Zhang 0011, Wei Hong, Arie E. Kaufman
MICCAI
2008
Springer
14 years 9 months ago
Assessment of Reliability of Multi-site Neuroimaging Via Traveling Phantom Study
Abstract. This paper describes a framework for quantitative analysis of neuroimaging data of traveling human phantoms used for cross-site validation. We focus on the analysis of ma...
Sylvain Gouttard, Martin Styner, Marcel Prastawa...
SIGMOD
2004
ACM
184views Database» more  SIGMOD 2004»
14 years 8 months ago
Identifying Similarities, Periodicities and Bursts for Online Search Queries
We present several methods for mining knowledge from the query logs of the MSN search engine. Using the query logs, we build a time series for each query word or phrase (e.g., `Th...
Michail Vlachos, Christopher Meek, Zografoula Vage...