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BMCBI
2007
152views more  BMCBI 2007»
13 years 10 months ago
A cross-species alignment tool (CAT)
Background: The main two sorts of automatic gene annotation frameworks are ab initio and alignment-based, the latter splitting into two sub-groups. The first group is used for int...
Heng Li, Liang Guan, Tao Liu, Yiran Guo, Wei-Mou Z...
BMCBI
2007
106views more  BMCBI 2007»
13 years 9 months ago
Simultaneous identification of long similar substrings in large sets of sequences
Background: Sequence comparison faces new challenges today, with many complete genomes and large libraries of transcripts known. Gene annotation pipelines match these sequences in...
Jürgen Kleffe, Friedrich Möller, Burghar...
BMCBI
2005
292views more  BMCBI 2005»
13 years 9 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
BMCBI
2005
246views more  BMCBI 2005»
13 years 9 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
LRE
2007
101views more  LRE 2007»
13 years 9 months ago
The CHIL audiovisual corpus for lecture and meeting analysis inside smart rooms
The analysis of lectures and meetings inside smart rooms has recently attracted much interest in the literature, being the focus of international projects and technology evaluation...
Djamel Mostefa, Nicolas Moreau, Khalid Choukri, Ge...